Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ALX3O95076 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.32■□□□□ 0.04
ALX3O95076 DBET-201ENST00000630918 3363 ntBASIC15.32■□□□□ 0.04
ALX3O95076 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ALX3O95076 LINC01568-207ENST00000641790 1380 ntBASIC15.32■□□□□ 0.04
ALX3O95076 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.32■□□□□ 0.04
ALX3O95076 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ALX3O95076 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ALX3O95076 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ALX3O95076 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ALX3O95076 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
ALX3O95076 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ALX3O95076 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ALX3O95076 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ALX3O95076 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ALX3O95076 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
ALX3O95076 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 AC005104.2-201ENST00000427818 678 ntBASIC15.31■□□□□ 0.04
ALX3O95076 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
ALX3O95076 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.31■□□□□ 0.04
ALX3O95076 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.31■□□□□ 0.04
ALX3O95076 GCSHP2-201ENST00000560971 527 ntBASIC15.31■□□□□ 0.04
ALX3O95076 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.31■□□□□ 0.04
ALX3O95076 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 AC016396.2-201ENST00000562575 1417 ntBASIC15.31■□□□□ 0.04
ALX3O95076 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ALX3O95076 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.31■□□□□ 0.04
ALX3O95076 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ALX3O95076 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.3■□□□□ 0.04
ALX3O95076 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.3■□□□□ 0.04
ALX3O95076 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.3■□□□□ 0.04
ALX3O95076 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 RASA4DP-201ENST00000460726 1199 ntBASIC15.3■□□□□ 0.04
ALX3O95076 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.3■□□□□ 0.04
ALX3O95076 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.3■□□□□ 0.04
ALX3O95076 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.3■□□□□ 0.04
ALX3O95076 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ALX3O95076 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms