Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
GPC4O75487 MINOS1P3-201ENST00000457048 203 ntBASIC17.34■□□□□ 0.37
GPC4O75487 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC4O75487 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC4O75487 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GPC4O75487 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GPC4O75487 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC4O75487 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
GPC4O75487 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.34■□□□□ 0.37
GPC4O75487 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC4O75487 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
GPC4O75487 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC4O75487 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GPC4O75487 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
GPC4O75487 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.33■□□□□ 0.37
GPC4O75487 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.33■□□□□ 0.37
GPC4O75487 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GPC4O75487 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.33■□□□□ 0.37
GPC4O75487 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC4O75487 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
GPC4O75487 HLA-J-201ENST00000462773 1622 ntBASIC17.33■□□□□ 0.37
GPC4O75487 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC4O75487 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC4O75487 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GPC4O75487 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.33■□□□□ 0.36
GPC4O75487 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GPC4O75487 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 POM121L3P-201ENST00000419331 1163 ntBASIC17.33■□□□□ 0.36
GPC4O75487 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC4O75487 HCG4P8-203ENST00000443049 980 ntBASIC17.33■□□□□ 0.36
GPC4O75487 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.33■□□□□ 0.36
GPC4O75487 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.33■□□□□ 0.36
GPC4O75487 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.33■□□□□ 0.36
GPC4O75487 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.33■□□□□ 0.36
GPC4O75487 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.33■□□□□ 0.36
GPC4O75487 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC4O75487 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GPC4O75487 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC4O75487 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC4O75487 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GPC4O75487 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GPC4O75487 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC4O75487 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.32■□□□□ 0.36
GPC4O75487 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GPC4O75487 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.32■□□□□ 0.36
GPC4O75487 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
GPC4O75487 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC4O75487 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.32■□□□□ 0.36
GPC4O75487 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC4O75487 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC4O75487 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GPC4O75487 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC4O75487 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GPC4O75487 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.32■□□□□ 0.36
GPC4O75487 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC4O75487 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC4O75487 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
GPC4O75487 INTS4P1-201ENST00000438455 1935 ntBASIC17.31■□□□□ 0.36
GPC4O75487 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
GPC4O75487 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GPC4O75487 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GPC4O75487 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.31■□□□□ 0.36
GPC4O75487 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC4O75487 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms