Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PFDN1O60925 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
PFDN1O60925 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PFDN1O60925 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN1O60925 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.06
PFDN1O60925 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PFDN1O60925 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.39■□□□□ 0.05
PFDN1O60925 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.39■□□□□ 0.05
PFDN1O60925 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.39■□□□□ 0.05
PFDN1O60925 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.39■□□□□ 0.05
PFDN1O60925 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PFDN1O60925 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PFDN1O60925 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.39■□□□□ 0.05
PFDN1O60925 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.39■□□□□ 0.05
PFDN1O60925 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.39■□□□□ 0.05
PFDN1O60925 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.39■□□□□ 0.05
PFDN1O60925 MIR3621-201ENST00000580529 85 ntBASIC15.39■□□□□ 0.05
PFDN1O60925 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PFDN1O60925 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.39■□□□□ 0.05
PFDN1O60925 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.39■□□□□ 0.05
PFDN1O60925 AL355001.2-201ENST00000620617 1191 ntBASIC15.39■□□□□ 0.05
PFDN1O60925 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PFDN1O60925 RBM17P2-201ENST00000616397 1405 ntBASIC15.39■□□□□ 0.05
PFDN1O60925 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.39■□□□□ 0.05
PFDN1O60925 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.39■□□□□ 0.05
PFDN1O60925 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN1O60925 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 TSPY21P-201ENST00000433481 731 ntBASIC15.38■□□□□ 0.05
PFDN1O60925 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.38■□□□□ 0.05
PFDN1O60925 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.38■□□□□ 0.05
PFDN1O60925 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.38■□□□□ 0.05
PFDN1O60925 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
PFDN1O60925 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PFDN1O60925 CICP24-201ENST00000605464 2705 ntBASIC15.38■□□□□ 0.05
PFDN1O60925 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
PFDN1O60925 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PFDN1O60925 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.38■□□□□ 0.05
PFDN1O60925 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
PFDN1O60925 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.37■□□□□ 0.05
PFDN1O60925 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.37■□□□□ 0.05
PFDN1O60925 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.37■□□□□ 0.05
PFDN1O60925 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PFDN1O60925 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PFDN1O60925 TFP1-202ENST00000475455 1573 ntBASIC15.37■□□□□ 0.05
PFDN1O60925 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PFDN1O60925 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms