Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.32■□□□□ 0.04
GMDSO60547 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 LINC00304-203ENST00000565008 1864 ntBASIC15.32■□□□□ 0.04
GMDSO60547 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
GMDSO60547 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.32■□□□□ 0.04
GMDSO60547 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GMDSO60547 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 TSPY22P-201ENST00000427496 604 ntBASIC15.32■□□□□ 0.04
GMDSO60547 DDX43P3-201ENST00000441064 443 ntBASIC15.32■□□□□ 0.04
GMDSO60547 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 GUSBP12-201ENST00000513727 720 ntBASIC15.32■□□□□ 0.04
GMDSO60547 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 RNF126P1-202ENST00000569893 925 ntBASIC15.32■□□□□ 0.04
GMDSO60547 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.32■□□□□ 0.04
GMDSO60547 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GMDSO60547 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 KRT8P47-201ENST00000604727 1398 ntBASIC15.32■□□□□ 0.04
GMDSO60547 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GMDSO60547 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.32■□□□□ 0.04
GMDSO60547 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
GMDSO60547 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.32■□□□□ 0.04
GMDSO60547 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GMDSO60547 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GMDSO60547 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.31■□□□□ 0.04
GMDSO60547 FAM86EP-206ENST00000510506 987 ntBASIC15.31■□□□□ 0.04
GMDSO60547 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
GMDSO60547 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.31■□□□□ 0.04
GMDSO60547 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.31■□□□□ 0.04
GMDSO60547 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.31■□□□□ 0.04
GMDSO60547 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GMDSO60547 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.31■□□□□ 0.04
GMDSO60547 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
GMDSO60547 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GMDSO60547 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GMDSO60547 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GMDSO60547 AL136379.1-201ENST00000623471 2642 ntBASIC15.3■□□□□ 0.04
GMDSO60547 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GMDSO60547 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
GMDSO60547 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GMDSO60547 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.3■□□□□ 0.04
GMDSO60547 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GMDSO60547 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms