Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 AC106730.1-201ENST00000566722 1090 ntBASIC19.4■□□□□ 0.7
CHMP2AO43633 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CHMP2AO43633 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHMP2AO43633 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHMP2AO43633 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP2AO43633 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP2AO43633 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP2AO43633 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP2AO43633 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CHMP2AO43633 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CHMP2AO43633 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP2AO43633 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMP2AO43633 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 AC009947.1-201ENST00000444350 727 ntBASIC19.39■□□□□ 0.69
CHMP2AO43633 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 AC108751.1-201ENST00000490852 363 ntBASIC19.39■□□□□ 0.69
CHMP2AO43633 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 PGM5P2-202ENST00000637225 1043 ntBASIC19.39■□□□□ 0.69
CHMP2AO43633 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMP2AO43633 AL590787.1-201ENST00000568856 1315 ntBASIC19.39■□□□□ 0.69
CHMP2AO43633 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP2AO43633 ZNF259P1-201ENST00000407656 1365 ntBASIC19.39■□□□□ 0.69
CHMP2AO43633 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 GPR89P-201ENST00000407924 1495 ntBASIC19.39■□□□□ 0.69
CHMP2AO43633 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHMP2AO43633 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2AO43633 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP2AO43633 AC141586.5-201ENST00000624546 2050 ntBASIC19.39■□□□□ 0.69
CHMP2AO43633 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP2AO43633 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2AO43633 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2AO43633 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2AO43633 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHMP2AO43633 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.38■□□□□ 0.69
CHMP2AO43633 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
CHMP2AO43633 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHMP2AO43633 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHMP2AO43633 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2AO43633 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
CHMP2AO43633 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.38■□□□□ 0.69
CHMP2AO43633 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.38■□□□□ 0.69
CHMP2AO43633 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.38■□□□□ 0.69
CHMP2AO43633 AC034105.1-201ENST00000563488 319 ntBASIC19.38■□□□□ 0.69
CHMP2AO43633 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2AO43633 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 AL671883.3-201ENST00000603274 991 ntBASIC19.38■□□□□ 0.69
CHMP2AO43633 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2AO43633 AL805961.1-202ENST00000641562 540 ntBASIC19.38■□□□□ 0.69
CHMP2AO43633 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2AO43633 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CHMP2AO43633 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP2AO43633 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHMP2AO43633 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 MIR574-201ENST00000385209 96 ntBASIC19.37■□□□□ 0.69
CHMP2AO43633 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 AC108073.2-201ENST00000464002 357 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms