Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.81■□□□□ 0.76
PRPF3O43395 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PRPF3O43395 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRPF3O43395 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.81■□□□□ 0.76
PRPF3O43395 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.81■□□□□ 0.76
PRPF3O43395 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 FDX1P1-201ENST00000449115 551 ntBASIC19.8■□□□□ 0.76
PRPF3O43395 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.8■□□□□ 0.76
PRPF3O43395 RPS15P9-201ENST00000494093 319 ntBASIC19.8■□□□□ 0.76
PRPF3O43395 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 AP001005.1-201ENST00000571755 1248 ntBASIC19.8■□□□□ 0.76
PRPF3O43395 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 AL356488.2-201ENST00000602755 427 ntBASIC19.8■□□□□ 0.76
PRPF3O43395 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PRPF3O43395 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF3O43395 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF3O43395 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
PRPF3O43395 AC092068.3-201ENST00000587894 2016 ntBASIC19.8■□□□□ 0.76
PRPF3O43395 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PRPF3O43395 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PRPF3O43395 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PRPF3O43395 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.79■□□□□ 0.76
PRPF3O43395 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.79■□□□□ 0.76
PRPF3O43395 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.79■□□□□ 0.76
PRPF3O43395 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.79■□□□□ 0.76
PRPF3O43395 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.79■□□□□ 0.76
PRPF3O43395 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.79■□□□□ 0.76
PRPF3O43395 AF228730.7-201ENST00000641842 219 ntBASIC19.79■□□□□ 0.76
PRPF3O43395 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.79■□□□□ 0.76
PRPF3O43395 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.79■□□□□ 0.76
PRPF3O43395 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PRPF3O43395 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
PRPF3O43395 AL121761.2-201ENST00000598007 1648 ntBASIC19.79■□□□□ 0.76
PRPF3O43395 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 LTB4R2-202ENST00000528054 3092 ntBASIC19.79■□□□□ 0.76
PRPF3O43395 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.79■□□□□ 0.76
PRPF3O43395 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PRPF3O43395 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF3O43395 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PRPF3O43395 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.78■□□□□ 0.76
PRPF3O43395 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.78■□□□□ 0.76
PRPF3O43395 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.78■□□□□ 0.76
PRPF3O43395 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PRPF3O43395 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF3O43395 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
PRPF3O43395 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms