Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GSC2O15499 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.62■□□□□ 0.25
GSC2O15499 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.62■□□□□ 0.25
GSC2O15499 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.62■□□□□ 0.25
GSC2O15499 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.62■□□□□ 0.25
GSC2O15499 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 RN7SL471P-201ENST00000580476 299 ntBASIC16.62■□□□□ 0.25
GSC2O15499 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.62■□□□□ 0.25
GSC2O15499 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.62■□□□□ 0.25
GSC2O15499 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GSC2O15499 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 AL391256.1-201ENST00000443260 1855 ntBASIC16.62■□□□□ 0.25
GSC2O15499 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.62■□□□□ 0.25
GSC2O15499 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GSC2O15499 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.62■□□□□ 0.25
GSC2O15499 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.62■□□□□ 0.25
GSC2O15499 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GSC2O15499 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GSC2O15499 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GSC2O15499 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
GSC2O15499 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GSC2O15499 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.61■□□□□ 0.25
GSC2O15499 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.61■□□□□ 0.25
GSC2O15499 RNA5SP413-201ENST00000516373 109 ntBASIC16.61■□□□□ 0.25
GSC2O15499 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.61■□□□□ 0.25
GSC2O15499 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.61■□□□□ 0.25
GSC2O15499 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
GSC2O15499 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.61■□□□□ 0.25
GSC2O15499 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GSC2O15499 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 AC006538.1-201ENST00000567905 1585 ntBASIC16.6■□□□□ 0.25
GSC2O15499 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GSC2O15499 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.6■□□□□ 0.25
GSC2O15499 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
GSC2O15499 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.6■□□□□ 0.25
GSC2O15499 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.6■□□□□ 0.25
GSC2O15499 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.6■□□□□ 0.25
GSC2O15499 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.6■□□□□ 0.25
GSC2O15499 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.6■□□□□ 0.25
GSC2O15499 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.6■□□□□ 0.25
GSC2O15499 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.6■□□□□ 0.25
GSC2O15499 AL023803.3-201ENST00000615559 522 ntBASIC16.6■□□□□ 0.25
GSC2O15499 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.6■□□□□ 0.25
GSC2O15499 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GSC2O15499 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GSC2O15499 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.6■□□□□ 0.25
GSC2O15499 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms