Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX4Q9UIU6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIX4Q9UIU6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.39■□□□□ 0.54
SIX4Q9UIU6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SIX4Q9UIU6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SIX4Q9UIU6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SIX4Q9UIU6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 MRPL20P1-201ENST00000400819 433 ntBASIC18.39■□□□□ 0.53
SIX4Q9UIU6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 IGLL3P-201ENST00000412472 434 ntBASIC18.39■□□□□ 0.53
SIX4Q9UIU6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 AC007967.2-201ENST00000432613 625 ntBASIC18.39■□□□□ 0.53
SIX4Q9UIU6 VN2R19P-201ENST00000442399 1052 ntBASIC18.39■□□□□ 0.53
SIX4Q9UIU6 HCG4B-203ENST00000450128 991 ntBASIC18.39■□□□□ 0.53
SIX4Q9UIU6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 MIR4751-201ENST00000578027 74 ntBASIC18.39■□□□□ 0.53
SIX4Q9UIU6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 AC002310.6-201ENST00000624451 1377 ntBASIC18.39■□□□□ 0.53
SIX4Q9UIU6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SIX4Q9UIU6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 KRT18P2-201ENST00000447938 1258 ntBASIC18.38■□□□□ 0.53
SIX4Q9UIU6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 AC010654.1-201ENST00000615722 808 ntBASIC18.38■□□□□ 0.53
SIX4Q9UIU6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX4Q9UIU6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 AC106820.2-201ENST00000563775 3264 ntBASIC18.37■□□□□ 0.53
SIX4Q9UIU6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 AC027601.4-201ENST00000611259 610 ntBASIC18.37■□□□□ 0.53
SIX4Q9UIU6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 AP001094.4-201ENST00000579008 2176 ntBASIC18.37■□□□□ 0.53
SIX4Q9UIU6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX4Q9UIU6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 822.1 ms