Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 AC002558.1-201ENST00000488906 803 ntBASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 AC090616.6-201ENST00000582640 721 ntBASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 AC069148.1-201ENST00000608741 768 ntBASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LIN7CQ9NUP9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms