Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 AURKB-203ENST00000577833 867 ntTSL 315.92■□□□□ 0.143e-8■□□□□ 9.6
DROSHAQ9NRR4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.43□□□□□ -1.544e-7■□□□□ 9.5
DROSHAQ9NRR4 PPT2-EGFL8-207ENST00000585246 1051 ntAPPRIS ALT2 TSL 232.83■■■□□ 2.853e-6■□□□□ 9.5
DROSHAQ9NRR4 PPT2-EGFL8-206ENST00000583227 1540 ntAPPRIS ALT2 TSL 526.94■■□□□ 1.93e-6■□□□□ 9.5
DROSHAQ9NRR4 PPT2-EGFL8-204ENST00000453656 1327 ntTSL 226.55■■□□□ 1.843e-6■□□□□ 9.5
DROSHAQ9NRR4 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 221.87■■□□□ 1.093e-6■□□□□ 9.5
DROSHAQ9NRR4 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.443e-6■□□□□ 9.5
DROSHAQ9NRR4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.932e-7■□□□□ 9.5
DROSHAQ9NRR4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.662e-7■□□□□ 9.5
DROSHAQ9NRR4 SLC39A7-203ENST00000444757 1015 ntTSL 517.4■□□□□ 0.382e-7■□□□□ 9.5
DROSHAQ9NRR4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC43.82■■■■■ 4.616e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC36.68■■■■□ 3.462e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-209ENST00000563674 719 ntTSL 335.23■■■■□ 3.232e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-208ENST00000563591 588 ntTSL 234.66■■■■□ 3.144e-7■□□□□ 9.5
DROSHAQ9NRR4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.146e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-212ENST00000567536 484 ntTSL 334.41■■■■□ 3.12e-7■□□□□ 9.5
DROSHAQ9NRR4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.66■■■□□ 2.666e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.532e-7■□□□□ 9.5
DROSHAQ9NRR4 DDOST-205ENST00000477229 766 ntTSL 226.49■■□□□ 1.836e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC25.29■■□□□ 1.642e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC24.45■■□□□ 1.52e-7■□□□□ 9.5
DROSHAQ9NRR4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.496e-7■□□□□ 9.5
DROSHAQ9NRR4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC24.26■■□□□ 1.476e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC23.46■■□□□ 1.352e-7■□□□□ 9.5
DROSHAQ9NRR4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC23.24■■□□□ 1.316e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC22.36■■□□□ 1.172e-7■□□□□ 9.5
DROSHAQ9NRR4 DDOST-203ENST00000464364 502 ntTSL 521.71■■□□□ 1.076e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.972e-7■□□□□ 9.5
DROSHAQ9NRR4 TRIP10-209ENST00000598843 469 ntTSL 220.59■□□□□ 0.896e-7■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-211ENST00000566209 533 ntTSL 419.71■□□□□ 0.754e-7■□□□□ 9.5
DROSHAQ9NRR4 MYL6-205ENST00000546845 452 ntTSL 314.04□□□□□ -0.166e-7■□□□□ 9.5
DROSHAQ9NRR4 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.496e-6■□□□□ 9.5
DROSHAQ9NRR4 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.526e-6■□□□□ 9.5
DROSHAQ9NRR4 SH2B1-210ENST00000566176 546 ntTSL 414.52□□□□□ -0.088e-8■□□□□ 9.5
DROSHAQ9NRR4 FBL-205ENST00000595545 896 ntTSL 213.36□□□□□ -0.272e-8■□□□□ 9.5
DROSHAQ9NRR4 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.295e-8■□□□□ 9.5
DROSHAQ9NRR4 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC11.46□□□□□ -0.585e-8■□□□□ 9.5
DROSHAQ9NRR4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC41.62■■■■■ 4.259e-7■□□□□ 9.5
DROSHAQ9NRR4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC37.59■■■■□ 3.619e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-210ENST00000540031 960 ntTSL 1 (best)36.4■■■■□ 3.429e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.29e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-203ENST00000438628 559 ntTSL 231.64■■■□□ 2.669e-7■□□□□ 9.5
DROSHAQ9NRR4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.559e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF219-205ENST00000553980 576 ntTSL 430.32■■■□□ 2.449e-7■□□□□ 9.5
DROSHAQ9NRR4 KRT19-202ENST00000455635 641 ntTSL 329.37■■■□□ 2.299e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF219-206ENST00000554478 545 ntTSL 424.85■■□□□ 1.579e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.479e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF219-211ENST00000556174 546 ntTSL 423.93■■□□□ 1.429e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF219-212ENST00000556944 609 ntTSL 423.33■■□□□ 1.339e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.239e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.069e-7■□□□□ 9.5
DROSHAQ9NRR4 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 521.06■□□□□ 0.969e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.959e-7■□□□□ 9.5
DROSHAQ9NRR4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC20.48■□□□□ 0.879e-7■□□□□ 9.5
DROSHAQ9NRR4 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.81e-8■□□□□ 9.5
DROSHAQ9NRR4 GYG2-202ENST00000381157 731 ntTSL 1 (best)20.02■□□□□ 0.81e-8■□□□□ 9.5
DROSHAQ9NRR4 ZNF219-209ENST00000555697 654 ntTSL 219.66■□□□□ 0.749e-7■□□□□ 9.5
DROSHAQ9NRR4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.699e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.579e-7■□□□□ 9.5
DROSHAQ9NRR4 CCDC57-201ENST00000327026 5379 ntTSL 218.18■□□□□ 0.59e-7■□□□□ 9.5
DROSHAQ9NRR4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.489e-7■□□□□ 9.5
DROSHAQ9NRR4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.489e-7■□□□□ 9.5
DROSHAQ9NRR4 CPNE1-214ENST00000435747 400 ntTSL 317.33■□□□□ 0.369e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.259e-7■□□□□ 9.5
DROSHAQ9NRR4 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.411e-8■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-206ENST00000536123 558 ntTSL 47.02□□□□□ -1.299e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-209ENST00000539686 637 ntTSL 36.13□□□□□ -1.439e-7■□□□□ 9.5
DROSHAQ9NRR4 ZNF84-207ENST00000539098 598 ntTSL 42.63□□□□□ -1.999e-7■□□□□ 9.5
DROSHAQ9NRR4 CTTN-207ENST00000483662 736 ntTSL 210.77□□□□□ -0.681e-9■□□□□ 9.5
DROSHAQ9NRR4 COL18A1-206ENST00000459895 588 ntTSL 319.76■□□□□ 0.753e-15■□□□□ 9.5
DROSHAQ9NRR4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31.98■■■□□ 2.711e-7■□□□□ 9.5
DROSHAQ9NRR4 SGMS1-208ENST00000608287 542 ntTSL 430.63■■■□□ 2.491e-7■□□□□ 9.5
DROSHAQ9NRR4 SGMS1-209ENST00000609445 594 ntTSL 425.01■■□□□ 1.591e-7■□□□□ 9.5
DROSHAQ9NRR4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC21.71■■□□□ 1.071e-7■□□□□ 9.5
DROSHAQ9NRR4 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.661e-7■□□□□ 9.5
DROSHAQ9NRR4 FAM96A-205ENST00000559705 636 ntTSL 319.2■□□□□ 0.661e-7■□□□□ 9.5
DROSHAQ9NRR4 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC18.54■□□□□ 0.561e-7■□□□□ 9.5
DROSHAQ9NRR4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC18.05■□□□□ 0.481e-7■□□□□ 9.5
DROSHAQ9NRR4 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.41e-7■□□□□ 9.5
DROSHAQ9NRR4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.08□□□□□ -2.081e-7■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-203ENST00000586518 1701 nt44.52■■■■■ 4.727e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-209ENST00000589949 842 ntTSL 228.21■■■□□ 2.117e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-207ENST00000589417 575 ntTSL 227.06■■□□□ 1.927e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.727e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-213ENST00000593254 894 ntTSL 520.89■□□□□ 0.937e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-205ENST00000587171 586 ntTSL 220.35■□□□□ 0.857e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.617e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC18.28■□□□□ 0.527e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC16.64■□□□□ 0.267e-39■□□□□ 9.5
DROSHAQ9NRR4 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.017e-39■□□□□ 9.5
DROSHAQ9NRR4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.994e-21■□□□□ 9.5
DROSHAQ9NRR4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.84e-21■□□□□ 9.5
DROSHAQ9NRR4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.494e-21■□□□□ 9.5
DROSHAQ9NRR4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.244e-21■□□□□ 9.5
DROSHAQ9NRR4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.974e-21■□□□□ 9.5
DROSHAQ9NRR4 CCDC183-206ENST00000484858 422 ntTSL 329.66■■■□□ 2.343e-9■□□□□ 9.5
DROSHAQ9NRR4 CCDC183-207ENST00000496839 744 ntTSL 523.51■■□□□ 1.353e-9■□□□□ 9.5
DROSHAQ9NRR4 CLOCK-203ENST00000435527 746 ntTSL 327.8■■■□□ 2.046e-10■□□□□ 9.5
DROSHAQ9NRR4 AATK-AS1-202ENST00000571031 1488 ntTSL 1 (best)32.25■■■□□ 2.753e-6■□□□□ 9.4
DROSHAQ9NRR4 AATK-AS1-201ENST00000414089 1577 ntTSL 230.01■■■□□ 2.393e-6■□□□□ 9.4
Retrieved 100 of 16,331 protein–RNA pairs in 400.6 ms