RNA–Protein interactions for RNA: ENST00000483662.2

CTTN-207, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-207ENST00000483662 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
CTTN-207ENST00000483662 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
CTTN-207ENST00000483662 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
CTTN-207ENST00000483662 NISCHQ9Y2I1 1504 aa17.2■□□□□ 0.34
CTTN-207ENST00000483662 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
CTTN-207ENST00000483662 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
CTTN-207ENST00000483662 FOXD1Q16676 465 aa15.85■□□□□ 0.13
CTTN-207ENST00000483662 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
CTTN-207ENST00000483662 ADRA2BP18089 450 aa15.54■□□□□ 0.08
CTTN-207ENST00000483662 ABCC9O60706 1549 aa15.48■□□□□ 0.07
CTTN-207ENST00000483662 CCDC180Q9P1Z9 1646 aa15.38■□□□□ 0.05
CTTN-207ENST00000483662 PIAS4Q8N2W9 510 aaPredicted RBP15□□□□□ -0.01
CTTN-207ENST00000483662 DNAJC5BQ9UF47 199 aa14.66□□□□□ -0.06
CTTN-207ENST00000483662 KCNA4P22459 653 aa14.64□□□□□ -0.07
CTTN-207ENST00000483662 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
CTTN-207ENST00000483662 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
CTTN-207ENST00000483662 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
CTTN-207ENST00000483662 NACADO15069 1562 aa14.51□□□□□ -0.09
CTTN-207ENST00000483662 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
CTTN-207ENST00000483662 MSH5O43196 834 aa14.45□□□□□ -0.1
CTTN-207ENST00000483662 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
CTTN-207ENST00000483662 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
CTTN-207ENST00000483662 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
CTTN-207ENST00000483662 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
CTTN-207ENST00000483662 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
CTTN-207ENST00000483662 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
CTTN-207ENST00000483662 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
CTTN-207ENST00000483662 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
CTTN-207ENST00000483662 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
CTTN-207ENST00000483662 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
CTTN-207ENST00000483662 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
CTTN-207ENST00000483662 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
CTTN-207ENST00000483662 CC2D2AQ9P2K1 1620 aa13.99□□□□□ -0.17
CTTN-207ENST00000483662 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
CTTN-207ENST00000483662 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
CTTN-207ENST00000483662 CECR2Q9BXF3 1484 aa13.89□□□□□ -0.19
CTTN-207ENST00000483662 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
CTTN-207ENST00000483662 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
CTTN-207ENST00000483662 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
CTTN-207ENST00000483662 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
CTTN-207ENST00000483662 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CTTN-207ENST00000483662 ZBTB22O15209 634 aa13.49□□□□□ -0.25
CTTN-207ENST00000483662 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
CTTN-207ENST00000483662 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
CTTN-207ENST00000483662 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
CTTN-207ENST00000483662 NESP48681 1621 aa13.37□□□□□ -0.27
CTTN-207ENST00000483662 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
CTTN-207ENST00000483662 MROH2BQ7Z745 1585 aa13.32□□□□□ -0.28
CTTN-207ENST00000483662 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
CTTN-207ENST00000483662 SMARCA2P51531 1590 aa13.3□□□□□ -0.28
CTTN-207ENST00000483662 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
CTTN-207ENST00000483662 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
CTTN-207ENST00000483662 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
CTTN-207ENST00000483662 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
CTTN-207ENST00000483662 BAZ1BQ9UIG0 1483 aaKnown RBP13.24□□□□□ -0.29
CTTN-207ENST00000483662 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
CTTN-207ENST00000483662 CUX2O14529 1486 aa13.2□□□□□ -0.3
CTTN-207ENST00000483662 WIZO95785 1651 aa13.2□□□□□ -0.3
CTTN-207ENST00000483662 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
CTTN-207ENST00000483662 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
CTTN-207ENST00000483662 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
CTTN-207ENST00000483662 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
CTTN-207ENST00000483662 CADPSQ9ULU8 1353 aa13.01□□□□□ -0.33
CTTN-207ENST00000483662 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
CTTN-207ENST00000483662 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
CTTN-207ENST00000483662 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.33
CTTN-207ENST00000483662 WDR62O43379 1518 aa12.93□□□□□ -0.34
CTTN-207ENST00000483662 MRC2Q9UBG0 1479 aa12.93□□□□□ -0.34
CTTN-207ENST00000483662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.341e-12■■■□□ 15.2
CTTN-207ENST00000483662 TOP2AP11388 1531 aaKnown RBP12.91□□□□□ -0.34
CTTN-207ENST00000483662 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
CTTN-207ENST00000483662 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
CTTN-207ENST00000483662 CFTRP13569 1480 aa12.88□□□□□ -0.35
CTTN-207ENST00000483662 CEP164Q9UPV0 1460 aa12.86□□□□□ -0.35
CTTN-207ENST00000483662 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
CTTN-207ENST00000483662 CCDC88BA6NC98 1476 aa12.81□□□□□ -0.36
CTTN-207ENST00000483662 PRDM2Q13029 1718 aa12.8□□□□□ -0.36
CTTN-207ENST00000483662 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
CTTN-207ENST00000483662 ZNF608Q9ULD9 1512 aaPredicted RBP12.73□□□□□ -0.37
CTTN-207ENST00000483662 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
CTTN-207ENST00000483662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
CTTN-207ENST00000483662 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
CTTN-207ENST00000483662 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
CTTN-207ENST00000483662 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
CTTN-207ENST00000483662 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
CTTN-207ENST00000483662 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
CTTN-207ENST00000483662 EIF4G3O43432 1585 aaKnown RBP12.6□□□□□ -0.39
CTTN-207ENST00000483662 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
CTTN-207ENST00000483662 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
CTTN-207ENST00000483662 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
CTTN-207ENST00000483662 RIMBP3CA6NJZ7 1639 aa12.59□□□□□ -0.39
CTTN-207ENST00000483662 RIMBP3BA6NNM3 1639 aa12.59□□□□□ -0.39
CTTN-207ENST00000483662 RIMBP3Q9UFD9 1639 aa12.59□□□□□ -0.39
CTTN-207ENST00000483662 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.49e-14■■■■■ 30.3
CTTN-207ENST00000483662 CHD1O14646 1710 aa12.57□□□□□ -0.4
CTTN-207ENST00000483662 POTEDQ86YR6 584 aa12.56□□□□□ -0.4
CTTN-207ENST00000483662 RAD54L2Q9Y4B4 1467 aa12.56□□□□□ -0.4
CTTN-207ENST00000483662 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
CTTN-207ENST00000483662 CUX1P39880 1505 aa12.51□□□□□ -0.41
CTTN-207ENST00000483662 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms