Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRMS1Q9HCU9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRMS1Q9HCU9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRMS1Q9HCU9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRMS1Q9HCU9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.95■□□□□ 0.78
BRMS1Q9HCU9 AC079776.2-201ENST00000641154 1609 ntBASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 AC073592.4-201ENST00000623827 446 ntBASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRMS1Q9HCU9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.93■□□□□ 0.78
BRMS1Q9HCU9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 AC148477.5-201ENST00000625164 1645 ntBASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 AL139288.1-201ENST00000623748 933 ntBASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRMS1Q9HCU9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms