Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK3Q9H422 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 UXT-AS1-201ENST00000590504 1525 ntBASIC18.77■□□□□ 0.6
HIPK3Q9H422 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK3Q9H422 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.77■□□□□ 0.59
HIPK3Q9H422 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 AC008677.1-201ENST00000519230 1561 ntBASIC18.76■□□□□ 0.59
HIPK3Q9H422 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 KRT18P55-202ENST00000578578 1546 ntBASIC18.76■□□□□ 0.59
HIPK3Q9H422 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 HLA-J-202ENST00000469281 1241 ntBASIC18.76■□□□□ 0.59
HIPK3Q9H422 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 AC026150.2-201ENST00000564693 1156 ntBASIC18.76■□□□□ 0.59
HIPK3Q9H422 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.76■□□□□ 0.59
HIPK3Q9H422 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK3Q9H422 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 SPDYE7P-202ENST00000420373 878 ntBASIC18.75■□□□□ 0.59
HIPK3Q9H422 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 GAPDHP21-201ENST00000450301 1010 ntBASIC18.75■□□□□ 0.59
HIPK3Q9H422 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 AL512638.1-201ENST00000457493 794 ntBASIC18.75■□□□□ 0.59
HIPK3Q9H422 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HIPK3Q9H422 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIPK3Q9H422 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 SPDYE14P-201ENST00000442619 822 ntBASIC18.74■□□□□ 0.59
HIPK3Q9H422 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HIPK3Q9H422 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIPK3Q9H422 KRT8P23-201ENST00000560090 1207 ntBASIC18.74■□□□□ 0.59
HIPK3Q9H422 LINC01225-203ENST00000563550 1244 ntBASIC18.74■□□□□ 0.59
HIPK3Q9H422 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms