Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CFAP53Q96M91 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.05■■□□□ 1.28
CFAP53Q96M91 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFAP53Q96M91 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CFAP53Q96M91 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFAP53Q96M91 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CFAP53Q96M91 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFAP53Q96M91 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CFAP53Q96M91 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFAP53Q96M91 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CFAP53Q96M91 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFAP53Q96M91 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 RIN3-211ENST00000557762 517 ntTSL 3 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CFAP53Q96M91 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFAP53Q96M91 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 PP12613-201ENST00000424958 2230 ntBASIC23.03■■□□□ 1.28
CFAP53Q96M91 MRPL20P1-201ENST00000400819 433 ntBASIC23.03■■□□□ 1.28
CFAP53Q96M91 LBH-204ENST00000406087 559 ntTSL 4 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP53Q96M91 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC23.03■■□□□ 1.28
CFAP53Q96M91 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP53Q96M91 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP53Q96M91 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP53Q96M91 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP53Q96M91 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP53Q96M91 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP53Q96M91 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP53Q96M91 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 PMS2P1-201ENST00000431037 1228 ntBASIC23.02■■□□□ 1.28
CFAP53Q96M91 PAWRP1-201ENST00000451083 565 ntBASIC23.02■■□□□ 1.28
CFAP53Q96M91 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP53Q96M91 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 MIR4751-201ENST00000578027 74 ntBASIC23.02■■□□□ 1.28
CFAP53Q96M91 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 AC004790.2-201ENST00000623588 572 ntBASIC23.02■■□□□ 1.28
CFAP53Q96M91 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC23.02■■□□□ 1.28
CFAP53Q96M91 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP53Q96M91 PCDHB18P-201ENST00000524813 2368 ntBASIC23.01■■□□□ 1.27
CFAP53Q96M91 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP53Q96M91 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 MIR574-201ENST00000385209 96 ntBASIC23.01■■□□□ 1.27
CFAP53Q96M91 PRSS29P-201ENST00000440800 595 ntBASIC23.01■■□□□ 1.27
CFAP53Q96M91 KRT18P58-201ENST00000527480 1120 ntBASIC23.01■■□□□ 1.27
CFAP53Q96M91 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP53Q96M91 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP53Q96M91 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP53Q96M91 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CFAP53Q96M91 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms