Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 LIN28AP1-201ENST00000429574 405 ntBASIC16.64■□□□□ 0.25
VPS33AQ96AX1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 GPR32P1-201ENST00000601788 811 ntBASIC16.64■□□□□ 0.25
VPS33AQ96AX1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.64■□□□□ 0.25
VPS33AQ96AX1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.64■□□□□ 0.25
VPS33AQ96AX1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 AC078925.2-201ENST00000624013 1973 ntBASIC16.64■□□□□ 0.25
VPS33AQ96AX1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 CICP6-201ENST00000457191 2729 ntBASIC16.63■□□□□ 0.25
VPS33AQ96AX1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 AL603756.1-201ENST00000606511 2163 ntBASIC16.63■□□□□ 0.25
VPS33AQ96AX1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 MIR662-201ENST00000384847 95 ntBASIC16.63■□□□□ 0.25
VPS33AQ96AX1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 ATP5G1P1-201ENST00000448724 379 ntBASIC16.63■□□□□ 0.25
VPS33AQ96AX1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 AC093827.2-201ENST00000512654 315 ntBASIC16.63■□□□□ 0.25
VPS33AQ96AX1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.63■□□□□ 0.25
VPS33AQ96AX1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS33AQ96AX1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 COX5BP2-201ENST00000392354 334 ntBASIC16.62■□□□□ 0.25
VPS33AQ96AX1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 AC139887.4-201ENST00000607877 719 ntBASIC16.62■□□□□ 0.25
VPS33AQ96AX1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS33AQ96AX1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms