Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST2Q8NFU1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
BEST2Q8NFU1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
BEST2Q8NFU1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 CRYGEP-201ENST00000412192 528 ntBASIC18.54■□□□□ 0.56
BEST2Q8NFU1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.54■□□□□ 0.56
BEST2Q8NFU1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST2Q8NFU1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 KRT18P13-201ENST00000400056 1290 ntBASIC18.53■□□□□ 0.56
BEST2Q8NFU1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.53■□□□□ 0.56
BEST2Q8NFU1 AC007967.2-201ENST00000432613 625 ntBASIC18.53■□□□□ 0.56
BEST2Q8NFU1 KRT18P3-201ENST00000451602 1288 ntBASIC18.53■□□□□ 0.56
BEST2Q8NFU1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST2Q8NFU1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 VN2R19P-201ENST00000442399 1052 ntBASIC18.52■□□□□ 0.56
BEST2Q8NFU1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 RNA5SP416-201ENST00000516838 111 ntBASIC18.52■□□□□ 0.56
BEST2Q8NFU1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 AC010654.1-201ENST00000615722 808 ntBASIC18.52■□□□□ 0.56
BEST2Q8NFU1 AC139530.3-201ENST00000620344 690 ntBASIC18.52■□□□□ 0.56
BEST2Q8NFU1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST2Q8NFU1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST2Q8NFU1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms