Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 KLF4P1-201ENST00000412782 1185 ntBASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 RHOQP3-201ENST00000437982 621 ntBASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 AC023141.13-201ENST00000604991 943 ntBASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 AC091812.2-201ENST00000619081 385 ntBASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF248Q8NDW4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 AC135776.1-201ENST00000319817 2481 ntBASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 AC003669.1-201ENST00000334569 611 ntBASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 FAM86GP-201ENST00000448322 971 ntBASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 AC025580.3-201ENST00000617932 1424 ntBASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 AC007613.1-201ENST00000572811 2597 ntBASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 AC132938.6-201ENST00000623828 1655 ntBASIC16.5■□□□□ 0.23
ZNF248Q8NDW4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 AC004461.1-201ENST00000412461 403 ntBASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 RNA5SP421-201ENST00000516864 134 ntBASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF248Q8NDW4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms