Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 AP001094.4-201ENST00000579008 2176 ntBASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 ACTG1P4-201ENST00000425123 1122 ntBASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 AL450487.1-201ENST00000426799 995 ntBASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 SART3-203ENST00000546611 1184 ntBASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF2Q8N5M1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATPAF2Q8N5M1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATPAF2Q8N5M1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ATPAF2Q8N5M1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.71■□□□□ 0.42
ATPAF2Q8N5M1 AC012313.1-201ENST00000593393 3059 ntBASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 EGFEM1P-202ENST00000431685 1563 ntBASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATPAF2Q8N5M1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 PRYP5-201ENST00000451909 266 ntBASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 AL691432.3-201ENST00000621860 400 ntBASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF2Q8N5M1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms