Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCML4Q8N228 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.88■□□□□ 0.45
SCML4Q8N228 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SCML4Q8N228 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCML4Q8N228 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCML4Q8N228 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCML4Q8N228 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCML4Q8N228 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SCML4Q8N228 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCML4Q8N228 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
SCML4Q8N228 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCML4Q8N228 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.87■□□□□ 0.45
SCML4Q8N228 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SCML4Q8N228 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.87■□□□□ 0.45
SCML4Q8N228 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
SCML4Q8N228 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCML4Q8N228 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.87■□□□□ 0.45
SCML4Q8N228 PMS2P1-201ENST00000431037 1228 ntBASIC17.87■□□□□ 0.45
SCML4Q8N228 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.87■□□□□ 0.45
SCML4Q8N228 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SCML4Q8N228 KRT18P58-201ENST00000527480 1120 ntBASIC17.87■□□□□ 0.45
SCML4Q8N228 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.87■□□□□ 0.45
SCML4Q8N228 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.87■□□□□ 0.45
SCML4Q8N228 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.87■□□□□ 0.45
SCML4Q8N228 AL671883.3-201ENST00000603274 991 ntBASIC17.87■□□□□ 0.45
SCML4Q8N228 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.87■□□□□ 0.45
SCML4Q8N228 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SCML4Q8N228 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.87■□□□□ 0.45
SCML4Q8N228 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SCML4Q8N228 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.87■□□□□ 0.45
SCML4Q8N228 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCML4Q8N228 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCML4Q8N228 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCML4Q8N228 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SCML4Q8N228 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SCML4Q8N228 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
SCML4Q8N228 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.86■□□□□ 0.45
SCML4Q8N228 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML4Q8N228 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.86■□□□□ 0.45
SCML4Q8N228 AC107918.2-201ENST00000530817 355 ntBASIC17.86■□□□□ 0.45
SCML4Q8N228 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.86■□□□□ 0.45
SCML4Q8N228 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.86■□□□□ 0.45
SCML4Q8N228 MIR4751-201ENST00000578027 74 ntBASIC17.86■□□□□ 0.45
SCML4Q8N228 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.86■□□□□ 0.45
SCML4Q8N228 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML4Q8N228 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML4Q8N228 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.86■□□□□ 0.45
SCML4Q8N228 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.86■□□□□ 0.45
SCML4Q8N228 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML4Q8N228 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.86■□□□□ 0.45
SCML4Q8N228 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML4Q8N228 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML4Q8N228 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.86■□□□□ 0.45
SCML4Q8N228 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML4Q8N228 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.85■□□□□ 0.45
SCML4Q8N228 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SCML4Q8N228 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.85■□□□□ 0.45
SCML4Q8N228 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SCML4Q8N228 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML4Q8N228 IGLL3P-201ENST00000412472 434 ntBASIC17.85■□□□□ 0.45
SCML4Q8N228 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
SCML4Q8N228 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms