Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 GRK6P1-201ENST00000400595 1711 ntBASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 AL023284.2-201ENST00000405850 579 ntBASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 AC083906.2-201ENST00000511578 360 ntBASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CROCCP3Q8IVE0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CROCCP3Q8IVE0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms