Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 AC099336.1-202ENST00000602961 463 ntBASIC17.92■□□□□ 0.46
LRRC38Q5VT99 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.92■□□□□ 0.46
LRRC38Q5VT99 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC38Q5VT99 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 KRT16P4-201ENST00000453883 522 ntBASIC17.91■□□□□ 0.46
LRRC38Q5VT99 KRT18P35-201ENST00000510488 1269 ntBASIC17.91■□□□□ 0.46
LRRC38Q5VT99 AC092119.3-201ENST00000612618 583 ntBASIC17.91■□□□□ 0.46
LRRC38Q5VT99 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 TUBB8P12-201ENST00000308911 1335 ntBASIC17.91■□□□□ 0.46
LRRC38Q5VT99 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 TUBB7P-202ENST00000428444 1305 ntBASIC17.91■□□□□ 0.46
LRRC38Q5VT99 TUBB8P7-204ENST00000567960 1332 ntBASIC17.91■□□□□ 0.46
LRRC38Q5VT99 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC38Q5VT99 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 AC004817.3-201ENST00000602957 2129 ntBASIC17.9■□□□□ 0.46
LRRC38Q5VT99 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 PRYP5-201ENST00000451909 266 ntBASIC17.9■□□□□ 0.46
LRRC38Q5VT99 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 AP002490.2-201ENST00000524791 560 ntBASIC17.9■□□□□ 0.46
LRRC38Q5VT99 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC38Q5VT99 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC38Q5VT99 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC38Q5VT99 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC38Q5VT99 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.89■□□□□ 0.46
LRRC38Q5VT99 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
LRRC38Q5VT99 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
LRRC38Q5VT99 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.89■□□□□ 0.46
LRRC38Q5VT99 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 RNF216P1-203ENST00000404404 2427 ntBASIC17.89■□□□□ 0.45
LRRC38Q5VT99 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms