Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 AP005018.1-201ENST00000525475 301 ntBASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 NKG7-205ENST00000600427 520 ntTSL 3 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 INGX-202ENST00000489074 768 ntBASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 IGHV3-62-201ENST00000520057 340 ntBASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 BANF1P1-201ENST00000553684 263 ntBASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPAQ5VT25 AC116353.5-201ENST00000638148 1699 ntBASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 MIR346-201ENST00000362234 95 ntBASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPAQ5VT25 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
CDC42BPAQ5VT25 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC25.76■■□□□ 1.72
CDC42BPAQ5VT25 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 CALY-202ENST00000368555 783 ntTSL 2 BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 AC241585.1-201ENST00000433527 519 ntBASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 MIR4453-201ENST00000584019 89 ntBASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 CYP2A7P1-201ENST00000595391 815 ntBASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 AC073592.8-201ENST00000624126 511 ntBASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 LINC00896-202ENST00000609602 2128 ntBASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDC42BPAQ5VT25 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 GOLGA6L11P-201ENST00000417252 1298 ntBASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 AC073389.1-201ENST00000595595 795 ntBASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 AC007967.4-201ENST00000614700 386 ntBASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 AC004408.2-201ENST00000623613 2777 ntBASIC25.75■■□□□ 1.71
CDC42BPAQ5VT25 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 GAPDHP21-201ENST00000450301 1010 ntBASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 COX11-202ENST00000571584 1108 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 MIR4492-201ENST00000581627 80 ntBASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 CECR7-204ENST00000609932 568 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 TOP3BP1-201ENST00000420768 1380 ntBASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms