Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.41■□□□□ 0.7
EPHB4P54760 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.41■□□□□ 0.7
EPHB4P54760 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EPHB4P54760 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.41■□□□□ 0.7
EPHB4P54760 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EPHB4P54760 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.41■□□□□ 0.7
EPHB4P54760 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EPHB4P54760 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
EPHB4P54760 SIGLEC16-201ENST00000599858 1437 ntBASIC19.41■□□□□ 0.7
EPHB4P54760 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHB4P54760 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.41■□□□□ 0.7
EPHB4P54760 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.41■□□□□ 0.7
EPHB4P54760 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
EPHB4P54760 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.4■□□□□ 0.7
EPHB4P54760 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
EPHB4P54760 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHB4P54760 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EPHB4P54760 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHB4P54760 IGLL3P-201ENST00000412472 434 ntBASIC19.4■□□□□ 0.7
EPHB4P54760 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
EPHB4P54760 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHB4P54760 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHB4P54760 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.4■□□□□ 0.7
EPHB4P54760 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.4■□□□□ 0.7
EPHB4P54760 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
EPHB4P54760 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHB4P54760 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
EPHB4P54760 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.4■□□□□ 0.7
EPHB4P54760 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHB4P54760 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHB4P54760 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EPHB4P54760 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EPHB4P54760 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
EPHB4P54760 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EPHB4P54760 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB4P54760 PCDHA12-202ENST00000613593 2588 ntBASIC19.39■□□□□ 0.7
EPHB4P54760 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHB4P54760 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHB4P54760 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
EPHB4P54760 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
EPHB4P54760 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHB4P54760 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.39■□□□□ 0.69
EPHB4P54760 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB4P54760 AL645608.8-201ENST00000606034 2086 ntBASIC19.39■□□□□ 0.69
EPHB4P54760 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHB4P54760 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHB4P54760 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
EPHB4P54760 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB4P54760 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB4P54760 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.39■□□□□ 0.69
EPHB4P54760 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB4P54760 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
EPHB4P54760 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB4P54760 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB4P54760 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHB4P54760 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHB4P54760 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB4P54760 AL589182.2-201ENST00000619332 1049 ntBASIC19.39■□□□□ 0.69
EPHB4P54760 AC004790.2-201ENST00000623588 572 ntBASIC19.39■□□□□ 0.69
EPHB4P54760 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB4P54760 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB4P54760 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB4P54760 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB4P54760 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHB4P54760 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
EPHB4P54760 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms