Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR4P51571 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SSR4P51571 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SSR4P51571 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SSR4P51571 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SSR4P51571 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 BX842568.4-201ENST00000421222 227 ntBASIC15.82■□□□□ 0.12
SSR4P51571 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR4P51571 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.82■□□□□ 0.12
SSR4P51571 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.82■□□□□ 0.12
SSR4P51571 PGAM5P1-201ENST00000518923 814 ntBASIC15.82■□□□□ 0.12
SSR4P51571 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
SSR4P51571 AC092865.5-201ENST00000545435 363 ntBASIC15.82■□□□□ 0.12
SSR4P51571 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.82■□□□□ 0.12
SSR4P51571 AC040169.1-201ENST00000565382 521 ntBASIC15.82■□□□□ 0.12
SSR4P51571 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SSR4P51571 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SSR4P51571 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR4P51571 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SSR4P51571 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR4P51571 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SSR4P51571 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SSR4P51571 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.81■□□□□ 0.12
SSR4P51571 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 KRT18P13-201ENST00000400056 1290 ntBASIC15.81■□□□□ 0.12
SSR4P51571 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR4P51571 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SSR4P51571 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.81■□□□□ 0.12
SSR4P51571 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SSR4P51571 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR4P51571 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR4P51571 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.81■□□□□ 0.12
SSR4P51571 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SSR4P51571 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.81■□□□□ 0.12
SSR4P51571 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SSR4P51571 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.81■□□□□ 0.12
SSR4P51571 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SSR4P51571 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR4P51571 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.8■□□□□ 0.12
SSR4P51571 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR4P51571 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSR4P51571 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSR4P51571 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
SSR4P51571 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR4P51571 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR4P51571 HCG4B-203ENST00000450128 991 ntBASIC15.8■□□□□ 0.12
SSR4P51571 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR4P51571 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.8■□□□□ 0.12
SSR4P51571 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.8■□□□□ 0.12
SSR4P51571 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SSR4P51571 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SSR4P51571 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.8■□□□□ 0.12
SSR4P51571 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR4P51571 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR4P51571 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms