Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 FAM185BP-201ENST00000443595 716 ntBASIC16.31■□□□□ 0.2
GABRA4P48169 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.31■□□□□ 0.2
GABRA4P48169 AC002347.1-201ENST00000569543 541 ntBASIC16.31■□□□□ 0.2
GABRA4P48169 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRA4P48169 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.31■□□□□ 0.2
GABRA4P48169 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.31■□□□□ 0.2
GABRA4P48169 ACTL9-202ENST00000612068 1252 ntBASIC16.31■□□□□ 0.2
GABRA4P48169 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRA4P48169 AL513190.1-201ENST00000621254 727 ntBASIC16.31■□□□□ 0.2
GABRA4P48169 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRA4P48169 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRA4P48169 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRA4P48169 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRA4P48169 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABRA4P48169 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GABRA4P48169 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRA4P48169 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRA4P48169 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRA4P48169 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRA4P48169 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRA4P48169 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.31■□□□□ 0.2
GABRA4P48169 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GABRA4P48169 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GABRA4P48169 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.3■□□□□ 0.2
GABRA4P48169 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
GABRA4P48169 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.3■□□□□ 0.2
GABRA4P48169 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 RPSAP43-201ENST00000402237 625 ntBASIC16.3■□□□□ 0.2
GABRA4P48169 MCCD1P2-201ENST00000423228 335 ntBASIC16.3■□□□□ 0.2
GABRA4P48169 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRA4P48169 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRA4P48169 CXCL1P1-201ENST00000502804 216 ntBASIC16.3■□□□□ 0.2
GABRA4P48169 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRA4P48169 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.3■□□□□ 0.2
GABRA4P48169 AC107918.2-201ENST00000530817 355 ntBASIC16.3■□□□□ 0.2
GABRA4P48169 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRA4P48169 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.3■□□□□ 0.2
GABRA4P48169 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.3■□□□□ 0.2
GABRA4P48169 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.3■□□□□ 0.2
GABRA4P48169 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRA4P48169 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRA4P48169 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABRA4P48169 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GABRA4P48169 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.3■□□□□ 0.2
GABRA4P48169 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRA4P48169 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GABRA4P48169 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRA4P48169 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
GABRA4P48169 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRA4P48169 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GABRA4P48169 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRA4P48169 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRA4P48169 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GABRA4P48169 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRA4P48169 UPF3AP3-201ENST00000420996 769 ntBASIC16.29■□□□□ 0.2
GABRA4P48169 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.29■□□□□ 0.2
GABRA4P48169 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.29■□□□□ 0.2
GABRA4P48169 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.29■□□□□ 0.2
GABRA4P48169 AC139530.3-201ENST00000620344 690 ntBASIC16.29■□□□□ 0.2
GABRA4P48169 REXO1L3P-201ENST00000622202 1288 ntBASIC16.29■□□□□ 0.2
GABRA4P48169 AC004877.2-201ENST00000623941 599 ntBASIC16.29■□□□□ 0.2
GABRA4P48169 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
GABRA4P48169 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GABRA4P48169 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.29■□□□□ 0.2
GABRA4P48169 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRA4P48169 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRA4P48169 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRA4P48169 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GABRA4P48169 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.28■□□□□ 0.2
GABRA4P48169 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms