Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN6P29350 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PTPN6P29350 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN6P29350 AC246785.2-201ENST00000432512 513 ntBASIC16.4■□□□□ 0.22
PTPN6P29350 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN6P29350 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.4■□□□□ 0.22
PTPN6P29350 AC124947.2-201ENST00000547118 1133 ntBASIC16.4■□□□□ 0.22
PTPN6P29350 AC012615.1-201ENST00000565797 1299 ntBASIC16.4■□□□□ 0.22
PTPN6P29350 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 AC011840.4-201ENST00000578471 627 ntBASIC16.4■□□□□ 0.22
PTPN6P29350 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN6P29350 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
PTPN6P29350 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PTPN6P29350 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN6P29350 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN6P29350 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN6P29350 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN6P29350 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN6P29350 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
PTPN6P29350 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN6P29350 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN6P29350 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN6P29350 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 DUSP5P1-201ENST00000441325 1139 ntBASIC16.39■□□□□ 0.21
PTPN6P29350 VENTXP7-201ENST00000475503 772 ntBASIC16.39■□□□□ 0.21
PTPN6P29350 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN6P29350 IGHV3-52-201ENST00000519770 353 ntBASIC16.39■□□□□ 0.21
PTPN6P29350 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN6P29350 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.39■□□□□ 0.21
PTPN6P29350 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN6P29350 Z69720.1-201ENST00000601483 472 ntBASIC16.39■□□□□ 0.21
PTPN6P29350 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.39■□□□□ 0.21
PTPN6P29350 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN6P29350 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PTPN6P29350 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN6P29350 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN6P29350 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN6P29350 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 AC018695.7-201ENST00000624587 2492 ntBASIC16.39■□□□□ 0.21
PTPN6P29350 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN6P29350 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN6P29350 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN6P29350 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN6P29350 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PTPN6P29350 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
PTPN6P29350 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.38■□□□□ 0.21
PTPN6P29350 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN6P29350 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN6P29350 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.38■□□□□ 0.21
PTPN6P29350 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN6P29350 AC091607.1-201ENST00000490318 1060 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms