Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB3BP20337 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB3BP20337 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB3BP20337 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB3BP20337 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 AC002558.1-201ENST00000488906 803 ntBASIC15.18■□□□□ 0.02
RAB3BP20337 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 AC112698.1-201ENST00000510299 916 ntBASIC15.18■□□□□ 0.02
RAB3BP20337 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB3BP20337 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB3BP20337 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB3BP20337 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.18■□□□□ 0.02
RAB3BP20337 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB3BP20337 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 AC113410.3-201ENST00000623366 203 ntBASIC15.18■□□□□ 0.02
RAB3BP20337 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 AC007950.2-201ENST00000615045 2347 ntBASIC15.18■□□□□ 0.02
RAB3BP20337 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 KRT89P-201ENST00000620027 1478 ntBASIC15.18■□□□□ 0.02
RAB3BP20337 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 TSPY26P-202ENST00000565928 3884 ntBASIC15.18■□□□□ 0.02
RAB3BP20337 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3BP20337 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB3BP20337 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3BP20337 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3BP20337 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3BP20337 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RAB3BP20337 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB3BP20337 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RAB3BP20337 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB3BP20337 UNC93B2-201ENST00000285383 730 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 RPS2P55-201ENST00000397318 883 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 AC009947.2-201ENST00000444014 672 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB3BP20337 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB3BP20337 AC107956.1-201ENST00000494359 873 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB3BP20337 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB3BP20337 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 AC024563.2-201ENST00000603282 481 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 AC026471.5-201ENST00000615068 467 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 AC009154.2-201ENST00000621177 724 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 AL157888.1-201ENST00000631930 593 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3BP20337 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB3BP20337 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RAB3BP20337 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 AC092850.2-201ENST00000623821 2697 ntBASIC15.17■□□□□ 0.02
RAB3BP20337 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3BP20337 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3BP20337 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RAB3BP20337 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3BP20337 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3BP20337 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB3BP20337 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB3BP20337 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
RAB3BP20337 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms