Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN1P18031 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN1P18031 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPN1P18031 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPN1P18031 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN1P18031 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 GGTLC5P-201ENST00000617623 998 ntBASIC18.26■□□□□ 0.51
PTPN1P18031 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN1P18031 AC004790.2-201ENST00000623588 572 ntBASIC18.26■□□□□ 0.51
PTPN1P18031 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN1P18031 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 PP12613-201ENST00000424958 2230 ntBASIC18.26■□□□□ 0.51
PTPN1P18031 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN1P18031 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN1P18031 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN1P18031 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTPN1P18031 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN1P18031 SLC25A1P3-201ENST00000395415 828 ntBASIC18.25■□□□□ 0.51
PTPN1P18031 PMS2P1-201ENST00000431037 1228 ntBASIC18.25■□□□□ 0.51
PTPN1P18031 KRT18P58-201ENST00000527480 1120 ntBASIC18.25■□□□□ 0.51
PTPN1P18031 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN1P18031 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN1P18031 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
PTPN1P18031 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 AC093525.9-201ENST00000624961 1746 ntBASIC18.25■□□□□ 0.51
PTPN1P18031 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN1P18031 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN1P18031 AC116353.5-201ENST00000638148 1699 ntBASIC18.25■□□□□ 0.51
PTPN1P18031 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PTPN1P18031 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
PTPN1P18031 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN1P18031 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
PTPN1P18031 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN1P18031 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN1P18031 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN1P18031 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN1P18031 MIR940-201ENST00000401276 94 ntBASIC18.24■□□□□ 0.51
PTPN1P18031 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN1P18031 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN1P18031 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN1P18031 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN1P18031 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN1P18031 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 AC027601.4-201ENST00000611259 610 ntBASIC18.24■□□□□ 0.51
PTPN1P18031 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN1P18031 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN1P18031 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PTPN1P18031 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN1P18031 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN1P18031 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PTPN1P18031 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN1P18031 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN1P18031 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PTPN1P18031 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN1P18031 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms