Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 AL353135.1-201ENST00000606729 504 ntBASIC16.4■□□□□ 0.22
ZNF888P0CJ79 AL139424.1-201ENST00000607572 797 ntBASIC16.4■□□□□ 0.22
ZNF888P0CJ79 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 AC004706.3-202ENST00000621574 984 ntBASIC16.4■□□□□ 0.22
ZNF888P0CJ79 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF888P0CJ79 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZNF888P0CJ79 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 AL031284.1-201ENST00000419297 478 ntBASIC16.39■□□□□ 0.21
ZNF888P0CJ79 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 AL662844.1-201ENST00000546340 181 ntBASIC16.39■□□□□ 0.21
ZNF888P0CJ79 AC006557.2-201ENST00000592985 1240 ntBASIC16.39■□□□□ 0.21
ZNF888P0CJ79 FAM215A-202ENST00000632077 792 ntBASIC16.39■□□□□ 0.21
ZNF888P0CJ79 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF888P0CJ79 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 RPS2P28-201ENST00000314255 741 ntBASIC16.38■□□□□ 0.21
ZNF888P0CJ79 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 ELK2BP-201ENST00000415014 1224 ntBASIC16.38■□□□□ 0.21
ZNF888P0CJ79 AC026396.1-201ENST00000419388 421 ntBASIC16.38■□□□□ 0.21
ZNF888P0CJ79 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF888P0CJ79 AC012640.2-201ENST00000561606 901 ntBASIC16.38■□□□□ 0.21
ZNF888P0CJ79 AL049840.3-201ENST00000602669 611 ntBASIC16.38■□□□□ 0.21
ZNF888P0CJ79 AC008735.5-201ENST00000623544 497 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms