Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LINC00167-201ENST00000530583 1419 ntBASIC14.49□□□□□ -0.09
SIX6O95475 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 AC093525.9-201ENST00000624961 1746 ntBASIC14.49□□□□□ -0.09
SIX6O95475 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.49□□□□□ -0.09
SIX6O95475 AC126177.1-201ENST00000547829 2218 ntBASIC14.49□□□□□ -0.09
SIX6O95475 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SIX6O95475 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
SIX6O95475 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SIX6O95475 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.49□□□□□ -0.09
SIX6O95475 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
SIX6O95475 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.49□□□□□ -0.09
SIX6O95475 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.49□□□□□ -0.09
SIX6O95475 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.49□□□□□ -0.09
SIX6O95475 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.49□□□□□ -0.09
SIX6O95475 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.49□□□□□ -0.09
SIX6O95475 MIR4758-201ENST00000577688 71 ntBASIC14.49□□□□□ -0.09
SIX6O95475 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.49□□□□□ -0.09
SIX6O95475 AC080038.1-201ENST00000611274 1154 ntBASIC14.49□□□□□ -0.09
SIX6O95475 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SIX6O95475 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SIX6O95475 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SIX6O95475 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIX6O95475 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.49□□□□□ -0.09
SIX6O95475 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.48□□□□□ -0.09
SIX6O95475 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
SIX6O95475 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
SIX6O95475 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.48□□□□□ -0.09
SIX6O95475 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SIX6O95475 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SIX6O95475 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.48□□□□□ -0.09
SIX6O95475 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.48□□□□□ -0.09
SIX6O95475 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.48□□□□□ -0.09
SIX6O95475 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.48□□□□□ -0.09
SIX6O95475 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.48□□□□□ -0.09
SIX6O95475 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.48□□□□□ -0.09
SIX6O95475 AC009065.1-201ENST00000564055 1225 ntBASIC14.48□□□□□ -0.09
SIX6O95475 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms