Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.49■□□□□ 0.39
KDELR3O43731 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.48■□□□□ 0.39
KDELR3O43731 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
KDELR3O43731 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.48■□□□□ 0.39
KDELR3O43731 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.48■□□□□ 0.39
KDELR3O43731 AC108751.1-201ENST00000490852 363 ntBASIC17.48■□□□□ 0.39
KDELR3O43731 SLC25A1P1-201ENST00000528351 927 ntBASIC17.48■□□□□ 0.39
KDELR3O43731 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
KDELR3O43731 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.48■□□□□ 0.39
KDELR3O43731 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KDELR3O43731 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.48■□□□□ 0.39
KDELR3O43731 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.48■□□□□ 0.39
KDELR3O43731 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.48■□□□□ 0.39
KDELR3O43731 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.48■□□□□ 0.39
KDELR3O43731 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.48■□□□□ 0.39
KDELR3O43731 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KDELR3O43731 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KDELR3O43731 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.47■□□□□ 0.39
KDELR3O43731 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 AC104109.2-201ENST00000602919 1418 ntBASIC17.47■□□□□ 0.39
KDELR3O43731 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.47■□□□□ 0.39
KDELR3O43731 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.47■□□□□ 0.39
KDELR3O43731 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.47■□□□□ 0.39
KDELR3O43731 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.47■□□□□ 0.39
KDELR3O43731 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.47■□□□□ 0.39
KDELR3O43731 AC108073.2-201ENST00000464002 357 ntBASIC17.47■□□□□ 0.39
KDELR3O43731 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.47■□□□□ 0.39
KDELR3O43731 AC034105.1-201ENST00000563488 319 ntBASIC17.47■□□□□ 0.39
KDELR3O43731 AC106730.1-201ENST00000566722 1090 ntBASIC17.47■□□□□ 0.39
KDELR3O43731 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.47■□□□□ 0.39
KDELR3O43731 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.47■□□□□ 0.39
KDELR3O43731 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KDELR3O43731 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 AC108860.2-201ENST00000562760 2183 ntBASIC17.47■□□□□ 0.39
KDELR3O43731 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.47■□□□□ 0.39
KDELR3O43731 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KDELR3O43731 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.46■□□□□ 0.39
KDELR3O43731 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.46■□□□□ 0.39
KDELR3O43731 AL022342.1-201ENST00000400363 863 ntBASIC17.46■□□□□ 0.39
KDELR3O43731 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KDELR3O43731 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.46■□□□□ 0.39
KDELR3O43731 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.46■□□□□ 0.39
KDELR3O43731 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.46■□□□□ 0.39
KDELR3O43731 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
KDELR3O43731 AC004790.2-201ENST00000623588 572 ntBASIC17.46■□□□□ 0.39
KDELR3O43731 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
KDELR3O43731 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
KDELR3O43731 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KDELR3O43731 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KDELR3O43731 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
KDELR3O43731 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.46■□□□□ 0.38
KDELR3O43731 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KDELR3O43731 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KDELR3O43731 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.45■□□□□ 0.38
KDELR3O43731 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.45■□□□□ 0.38
KDELR3O43731 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 ZNF259P1-201ENST00000407656 1365 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms