Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CACNB4O00305 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.06■□□□□ 0.32
CACNB4O00305 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CACNB4O00305 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CACNB4O00305 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.06■□□□□ 0.32
CACNB4O00305 VN2R19P-201ENST00000442399 1052 ntBASIC17.06■□□□□ 0.32
CACNB4O00305 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.06■□□□□ 0.32
CACNB4O00305 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.06■□□□□ 0.32
CACNB4O00305 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.06■□□□□ 0.32
CACNB4O00305 PGAM5P1-201ENST00000518923 814 ntBASIC17.06■□□□□ 0.32
CACNB4O00305 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.06■□□□□ 0.32
CACNB4O00305 GPALPP1-207ENST00000611650 899 ntBASIC17.06■□□□□ 0.32
CACNB4O00305 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CACNB4O00305 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.06■□□□□ 0.32
CACNB4O00305 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CACNB4O00305 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CACNB4O00305 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB4O00305 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CACNB4O00305 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CACNB4O00305 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.06■□□□□ 0.32
CACNB4O00305 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CACNB4O00305 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CACNB4O00305 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNB4O00305 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CACNB4O00305 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 AL590787.1-201ENST00000568856 1315 ntBASIC17.05■□□□□ 0.32
CACNB4O00305 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
CACNB4O00305 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CACNB4O00305 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.05■□□□□ 0.32
CACNB4O00305 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.05■□□□□ 0.32
CACNB4O00305 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNB4O00305 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CACNB4O00305 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.05■□□□□ 0.32
CACNB4O00305 AC010654.1-201ENST00000615722 808 ntBASIC17.05■□□□□ 0.32
CACNB4O00305 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.05■□□□□ 0.32
CACNB4O00305 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.05■□□□□ 0.32
CACNB4O00305 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNB4O00305 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.05■□□□□ 0.32
CACNB4O00305 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB4O00305 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CACNB4O00305 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNB4O00305 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CACNB4O00305 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CACNB4O00305 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNB4O00305 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.04■□□□□ 0.32
CACNB4O00305 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CACNB4O00305 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNB4O00305 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CACNB4O00305 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNB4O00305 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNB4O00305 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CACNB4O00305 AC067852.2-201ENST00000590513 2313 ntBASIC17.04■□□□□ 0.32
CACNB4O00305 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNB4O00305 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CACNB4O00305 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CACNB4O00305 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNB4O00305 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNB4O00305 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNB4O00305 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNB4O00305 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNB4O00305 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNB4O00305 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms