Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 ALG1L5P-201ENST00000482043 771 ntBASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 SNHG9-202ENST00000564014 471 ntBASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1G3Q9Y6M4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 ELL2P1-201ENST00000413990 1906 ntBASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 KRT19P2-202ENST00000557173 1012 ntBASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 BCAR1-209ENST00000546196 1340 ntBASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1G3Q9Y6M4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CSNK1G3Q9Y6M4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CSNK1G3Q9Y6M4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.89■□□□□ 0.3
CSNK1G3Q9Y6M4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CSNK1G3Q9Y6M4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 AC023141.13-201ENST00000604991 943 ntBASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 AL596442.2-201ENST00000610240 980 ntBASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms