Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 AC007967.3-201ENST00000434308 558 ntBASIC18.66■□□□□ 0.58
USP15Q9Y4E8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 AC073592.4-201ENST00000623827 446 ntBASIC18.66■□□□□ 0.58
USP15Q9Y4E8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
USP15Q9Y4E8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 PMPCAP1-201ENST00000508114 1576 ntBASIC18.65■□□□□ 0.58
USP15Q9Y4E8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 MIR770-201ENST00000390219 98 ntBASIC18.65■□□□□ 0.58
USP15Q9Y4E8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 AC138028.4-201ENST00000564984 1845 ntBASIC18.65■□□□□ 0.58
USP15Q9Y4E8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP15Q9Y4E8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP15Q9Y4E8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.64■□□□□ 0.58
USP15Q9Y4E8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 AL035633.1-201ENST00000406139 838 ntBASIC18.64■□□□□ 0.57
USP15Q9Y4E8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 AC011467.4-201ENST00000594891 528 ntBASIC18.64■□□□□ 0.57
USP15Q9Y4E8 AL078644.1-201ENST00000609881 752 ntBASIC18.64■□□□□ 0.57
USP15Q9Y4E8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP15Q9Y4E8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP15Q9Y4E8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP15Q9Y4E8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP15Q9Y4E8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP15Q9Y4E8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
USP15Q9Y4E8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
USP15Q9Y4E8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms