Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 HCG4B-203ENST00000450128 991 ntBASIC18.23■□□□□ 0.51
CDH9Q9ULB4 PGAM5P1-201ENST00000518923 814 ntBASIC18.23■□□□□ 0.51
CDH9Q9ULB4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 AC093525.9-201ENST00000624961 1746 ntBASIC18.23■□□□□ 0.51
CDH9Q9ULB4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 AC116353.5-201ENST00000638148 1699 ntBASIC18.22■□□□□ 0.51
CDH9Q9ULB4 EGFEM1P-202ENST00000431685 1563 ntBASIC18.22■□□□□ 0.51
CDH9Q9ULB4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 SLC25A1P3-201ENST00000395415 828 ntBASIC18.22■□□□□ 0.51
CDH9Q9ULB4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 OR7E47P-204ENST00000575924 449 ntBASIC18.22■□□□□ 0.51
CDH9Q9ULB4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH9Q9ULB4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.21■□□□□ 0.51
CDH9Q9ULB4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH9Q9ULB4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDH9Q9ULB4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 AC087163.2-201ENST00000457299 853 ntBASIC18.2■□□□□ 0.5
CDH9Q9ULB4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH9Q9ULB4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms