Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT1Q9P2V4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT1Q9P2V4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT1Q9P2V4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.7■□□□□ 0.26
LRIT1Q9P2V4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIT1Q9P2V4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.7■□□□□ 0.26
LRIT1Q9P2V4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 CEND1P1-201ENST00000451006 455 ntBASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 AC074386.1-202ENST00000463561 864 ntBASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
LRIT1Q9P2V4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 ELL2P1-201ENST00000413990 1906 ntBASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT1Q9P2V4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 AC254562.1-201ENST00000417586 456 ntBASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 AC012317.2-201ENST00000623305 2251 ntBASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT1Q9P2V4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms