Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC8.8□□□□□ -1
CDC42SE1Q9NRR8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 GPAT2P1-201ENST00000444924 1672 ntBASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 REST-206ENST00000612429 1376 ntTSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 REST-207ENST00000616975 1370 ntTSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AC087239.1-201ENST00000622671 572 ntBASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AC068587.7-201ENST00000641602 218 ntBASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 MBLAC2-202ENST00000514906 1936 ntBASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 AC078925.2-201ENST00000624013 1973 ntBASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC8.79□□□□□ -1
CDC42SE1Q9NRR8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms