Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS11Q9H270 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS11Q9H270 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
VPS11Q9H270 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS11Q9H270 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VPS11Q9H270 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS11Q9H270 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 MIR662-201ENST00000384847 95 ntBASIC17.43■□□□□ 0.38
VPS11Q9H270 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 BX664615.1-201ENST00000443558 458 ntBASIC17.43■□□□□ 0.38
VPS11Q9H270 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS11Q9H270 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.43■□□□□ 0.38
VPS11Q9H270 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS11Q9H270 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS11Q9H270 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS11Q9H270 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS11Q9H270 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS11Q9H270 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VPS11Q9H270 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VPS11Q9H270 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS11Q9H270 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.42■□□□□ 0.38
VPS11Q9H270 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VPS11Q9H270 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 AC005363.2-201ENST00000618631 242 ntBASIC17.42■□□□□ 0.38
VPS11Q9H270 AC133561.5-201ENST00000635547 218 ntBASIC17.42■□□□□ 0.38
VPS11Q9H270 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS11Q9H270 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VPS11Q9H270 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS11Q9H270 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS11Q9H270 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.42■□□□□ 0.38
VPS11Q9H270 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VPS11Q9H270 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VPS11Q9H270 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms