Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC22.67■■□□□ 1.22
ABCA3Q99758 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ABCA3Q99758 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.67■■□□□ 1.22
ABCA3Q99758 DGCR5-201ENST00000399539 862 ntBASIC22.67■■□□□ 1.22
ABCA3Q99758 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC22.67■■□□□ 1.22
ABCA3Q99758 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ABCA3Q99758 PRYP6-201ENST00000514804 343 ntBASIC22.67■■□□□ 1.22
ABCA3Q99758 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.67■■□□□ 1.22
ABCA3Q99758 LINC01451-201ENST00000623792 534 ntBASIC22.67■■□□□ 1.22
ABCA3Q99758 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ABCA3Q99758 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.67■■□□□ 1.22
ABCA3Q99758 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ABCA3Q99758 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ABCA3Q99758 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ABCA3Q99758 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ABCA3Q99758 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ABCA3Q99758 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.66■■□□□ 1.22
ABCA3Q99758 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ABCA3Q99758 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC22.66■■□□□ 1.22
ABCA3Q99758 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC22.66■■□□□ 1.22
ABCA3Q99758 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC22.66■■□□□ 1.22
ABCA3Q99758 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
ABCA3Q99758 RPS2P32-201ENST00000439199 892 ntBASIC22.66■■□□□ 1.22
ABCA3Q99758 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.66■■□□□ 1.22
ABCA3Q99758 AL033527.4-201ENST00000641026 673 ntBASIC22.66■■□□□ 1.22
ABCA3Q99758 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ABCA3Q99758 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.66■■□□□ 1.22
ABCA3Q99758 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ABCA3Q99758 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ABCA3Q99758 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.66■■□□□ 1.22
ABCA3Q99758 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ABCA3Q99758 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ABCA3Q99758 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
ABCA3Q99758 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 AP006294.1-201ENST00000415407 339 ntBASIC22.65■■□□□ 1.22
ABCA3Q99758 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC22.65■■□□□ 1.22
ABCA3Q99758 INE1-201ENST00000456273 945 ntBASIC22.65■■□□□ 1.22
ABCA3Q99758 SNX29P1-201ENST00000548357 1007 ntBASIC22.65■■□□□ 1.22
ABCA3Q99758 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC22.65■■□□□ 1.22
ABCA3Q99758 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC22.65■■□□□ 1.22
ABCA3Q99758 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC22.65■■□□□ 1.22
ABCA3Q99758 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ABCA3Q99758 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
ABCA3Q99758 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ABCA3Q99758 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ABCA3Q99758 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ABCA3Q99758 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
ABCA3Q99758 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC22.65■■□□□ 1.22
ABCA3Q99758 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC22.65■■□□□ 1.22
ABCA3Q99758 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ABCA3Q99758 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC22.65■■□□□ 1.22
ABCA3Q99758 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC22.65■■□□□ 1.22
ABCA3Q99758 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ABCA3Q99758 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA3Q99758 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ABCA3Q99758 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
ABCA3Q99758 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ABCA3Q99758 PP14571-201ENST00000404327 934 ntTSL 2 BASIC22.64■■□□□ 1.21
ABCA3Q99758 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
ABCA3Q99758 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
ABCA3Q99758 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC22.64■■□□□ 1.21
ABCA3Q99758 AC003101.2-201ENST00000612557 442 ntBASIC22.64■■□□□ 1.21
ABCA3Q99758 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ABCA3Q99758 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ABCA3Q99758 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.64■■□□□ 1.21
ABCA3Q99758 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ABCA3Q99758 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.64■■□□□ 1.21
ABCA3Q99758 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.64■■□□□ 1.21
ABCA3Q99758 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC22.64■■□□□ 1.21
ABCA3Q99758 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ABCA3Q99758 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ABCA3Q99758 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC22.64■■□□□ 1.21
ABCA3Q99758 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
ABCA3Q99758 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ABCA3Q99758 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 HLA-H-201ENST00000383620 1096 ntBASIC22.63■■□□□ 1.21
ABCA3Q99758 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
ABCA3Q99758 CENPM-206ENST00000407253 818 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 RN7SL837P-201ENST00000463010 287 ntBASIC22.63■■□□□ 1.21
ABCA3Q99758 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms