Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MUC4Q99102 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.66□□□□□ -0.38
MUC4Q99102 AC068472.1-201ENST00000474589 881 ntBASIC12.66□□□□□ -0.38
MUC4Q99102 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.66□□□□□ -0.38
MUC4Q99102 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.66□□□□□ -0.38
MUC4Q99102 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.66□□□□□ -0.38
MUC4Q99102 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.66□□□□□ -0.38
MUC4Q99102 MIR3652-201ENST00000579335 131 ntBASIC12.66□□□□□ -0.38
MUC4Q99102 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.66□□□□□ -0.38
MUC4Q99102 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
MUC4Q99102 AL592071.1-201ENST00000611956 408 ntBASIC12.66□□□□□ -0.38
MUC4Q99102 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MUC4Q99102 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.66□□□□□ -0.38
MUC4Q99102 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.65□□□□□ -0.38
MUC4Q99102 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.65□□□□□ -0.38
MUC4Q99102 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
MUC4Q99102 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
MUC4Q99102 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
MUC4Q99102 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 AC079328.2-201ENST00000561241 3354 ntBASIC12.65□□□□□ -0.38
MUC4Q99102 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.65□□□□□ -0.38
MUC4Q99102 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
MUC4Q99102 KLF4P1-201ENST00000412782 1185 ntBASIC12.65□□□□□ -0.38
MUC4Q99102 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
MUC4Q99102 AC009078.2-202ENST00000463353 338 ntBASIC12.65□□□□□ -0.38
MUC4Q99102 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
MUC4Q99102 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.65□□□□□ -0.38
MUC4Q99102 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.65□□□□□ -0.38
MUC4Q99102 AC092053.1-201ENST00000605787 1936 ntBASIC12.65□□□□□ -0.38
MUC4Q99102 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.65□□□□□ -0.38
MUC4Q99102 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.65□□□□□ -0.38
MUC4Q99102 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
MUC4Q99102 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.65□□□□□ -0.38
MUC4Q99102 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MUC4Q99102 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
MUC4Q99102 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
MUC4Q99102 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
MUC4Q99102 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
MUC4Q99102 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
MUC4Q99102 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.64□□□□□ -0.39
MUC4Q99102 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 AC012615.1-201ENST00000565797 1299 ntBASIC12.64□□□□□ -0.39
MUC4Q99102 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
MUC4Q99102 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.64□□□□□ -0.39
MUC4Q99102 AL138831.2-201ENST00000606564 490 ntBASIC12.64□□□□□ -0.39
MUC4Q99102 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.64□□□□□ -0.39
MUC4Q99102 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.64□□□□□ -0.39
MUC4Q99102 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms