Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 LINC02199-201ENST00000506655 2702 ntBASIC14.06□□□□□ -0.16
RAB40CQ96S21 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 SLC25A1P3-201ENST00000395415 828 ntBASIC14.06□□□□□ -0.16
RAB40CQ96S21 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 RBM17P1-201ENST00000453646 1190 ntBASIC14.06□□□□□ -0.16
RAB40CQ96S21 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40CQ96S21 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40CQ96S21 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 AC008741.2-201ENST00000612792 3115 ntBASIC14.05□□□□□ -0.16
RAB40CQ96S21 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 AC112698.1-201ENST00000510299 916 ntBASIC14.05□□□□□ -0.16
RAB40CQ96S21 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40CQ96S21 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40CQ96S21 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms