Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 HOXB1-202ENST00000577092 1414 ntBASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IPQ96QF0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 AC093525.9-201ENST00000624961 1746 ntBASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 KRT8P7-201ENST00000533003 1432 ntBASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 AL138781.1-201ENST00000566567 1274 ntBASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 AC144831.1-201ENST00000573312 2656 ntBASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IPQ96QF0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 ID1-201ENST00000376105 1233 ntBASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 HLA-L-209ENST00000420110 1011 ntBASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 AC142086.2-201ENST00000569753 217 ntBASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 LINC02228-204ENST00000642115 2962 ntBASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms