Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 AD000864.1-201ENST00000624076 2295 ntBASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 AC060834.1-201ENST00000443027 2032 ntBASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 FOSL1P1-201ENST00000511041 816 ntBASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 MIR3652-201ENST00000579335 131 ntBASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 SIGLEC16-201ENST00000599858 1437 ntBASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 AC148477.5-201ENST00000625164 1645 ntBASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MS4A4EQ96PG1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
MS4A4EQ96PG1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 AC099398.1-201ENST00000567919 2776 ntBASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 NUS1P1-201ENST00000446295 882 ntBASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 AC073592.4-201ENST00000623827 446 ntBASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A4EQ96PG1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 AC022211.2-201ENST00000585075 2527 ntBASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 AC079776.2-201ENST00000641154 1609 ntBASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A4EQ96PG1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms