Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AF228730.8-201ENST00000642140 221 ntBASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 UXT-AS1-201ENST00000590504 1525 ntBASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 UGT1A2P-201ENST00000454886 866 ntBASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 AC005412.3-201ENST00000580309 715 ntBASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 TNXA-203ENST00000507684 2038 ntBASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN4Q96NY8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 AC069120.2-201ENST00000524091 540 ntBASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 LINC01225-203ENST00000563550 1244 ntBASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 AC008677.1-201ENST00000519230 1561 ntBASIC17.79■□□□□ 0.44
NECTIN4Q96NY8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 SPDYE14P-201ENST00000442619 822 ntBASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN4Q96NY8 CR383656.12-201ENST00000549567 513 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms