Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 ELK2BP-201ENST00000415014 1224 ntBASIC16.71■□□□□ 0.27
RNF31Q96EP0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 AC009947.1-201ENST00000444350 727 ntBASIC16.71■□□□□ 0.27
RNF31Q96EP0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 AC145285.3-201ENST00000564603 959 ntBASIC16.71■□□□□ 0.27
RNF31Q96EP0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 AD001527.2-201ENST00000622994 785 ntBASIC16.71■□□□□ 0.27
RNF31Q96EP0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 AC006504.4-201ENST00000592118 1568 ntBASIC16.71■□□□□ 0.27
RNF31Q96EP0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF31Q96EP0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF31Q96EP0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RNF31Q96EP0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RNF31Q96EP0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RNF31Q96EP0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF31Q96EP0 AC022898.2-201ENST00000616822 1312 ntBASIC16.7■□□□□ 0.26
RNF31Q96EP0 AC097374.2-201ENST00000618617 1306 ntBASIC16.7■□□□□ 0.26
RNF31Q96EP0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 SPDYE21P-201ENST00000413323 827 ntBASIC16.7■□□□□ 0.26
RNF31Q96EP0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 AL691403.2-201ENST00000618460 490 ntBASIC16.7■□□□□ 0.26
RNF31Q96EP0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RNF31Q96EP0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF31Q96EP0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF31Q96EP0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF31Q96EP0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms