Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.64■□□□□ 0.25
UBE2E3Q969T4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.64■□□□□ 0.25
UBE2E3Q969T4 AC079776.2-201ENST00000641154 1609 ntBASIC16.63■□□□□ 0.25
UBE2E3Q969T4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 AP005117.1-201ENST00000584346 1413 ntBASIC16.63■□□□□ 0.25
UBE2E3Q969T4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 AC106795.1-205ENST00000512851 1056 ntBASIC16.63■□□□□ 0.25
UBE2E3Q969T4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E3Q969T4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.62■□□□□ 0.25
UBE2E3Q969T4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.62■□□□□ 0.25
UBE2E3Q969T4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.62■□□□□ 0.25
UBE2E3Q969T4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 AC091304.2-201ENST00000564639 760 ntBASIC16.62■□□□□ 0.25
UBE2E3Q969T4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E3Q969T4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E3Q969T4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms