Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 EMBP1-201ENST00000458200 901 ntBASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 LINC01711-201ENST00000598340 967 ntBASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 NKILA-202ENST00000614771 2598 ntBASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH19Q8TAB3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 AC011676.5-201ENST00000624864 2660 ntBASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 AC106795.1-205ENST00000512851 1056 ntBASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH19Q8TAB3 AC106886.4-201ENST00000623557 2502 ntBASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH19Q8TAB3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms