Protein–RNA interactions for Protein: Q8NFD5

ARID1B, AT-rich interactive domain-containing protein 1B, humanhuman

Predicted RBP Predictions only

Length 2,236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1BQ8NFD5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ARID1BQ8NFD5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID1BQ8NFD5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID1BQ8NFD5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.8■□□□□ 0.28
ARID1BQ8NFD5 FAM8A3P-201ENST00000427218 844 ntBASIC16.8■□□□□ 0.28
ARID1BQ8NFD5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.8■□□□□ 0.28
ARID1BQ8NFD5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID1BQ8NFD5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 AC092919.2-201ENST00000623631 1645 ntBASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID1BQ8NFD5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 MIR770-201ENST00000390219 98 ntBASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 HLA-J-203ENST00000494367 1087 ntBASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 AC099522.2-201ENST00000607001 744 ntBASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 AC006116.8-202ENST00000587620 1550 ntBASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 AC005332.8-201ENST00000622750 2735 ntBASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 AC011467.4-201ENST00000594891 528 ntBASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.78■□□□□ 0.28
ARID1BQ8NFD5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 AC129492.6-201ENST00000611383 1305 ntBASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 LINC00982-205ENST00000420957 435 ntBASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 PAWRP1-201ENST00000451083 565 ntBASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID1BQ8NFD5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ARID1BQ8NFD5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms