Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 IGLL3P-201ENST00000412472 434 ntBASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 SIGLEC30P-201ENST00000455569 941 ntBASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 AC007064.4-201ENST00000637740 555 ntBASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 GMCL1P1-201ENST00000463439 1581 ntBASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF248Q8NDW4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 AL354751.1-201ENST00000412768 1863 ntBASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 AC190387.1-201ENST00000551683 408 ntBASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 AC138761.1-201ENST00000584393 385 ntBASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 AL513210.1-201ENST00000629608 234 ntBASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 AL805961.1-202ENST00000641562 540 ntBASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ZNF248Q8NDW4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 COX5BP2-201ENST00000392354 334 ntBASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 DDX43P3-201ENST00000441064 443 ntBASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 MIR4745-201ENST00000577608 62 ntBASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 GGTLC5P-201ENST00000617623 998 ntBASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF248Q8NDW4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 AL353593.2-201ENST00000602529 1483 ntBASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF248Q8NDW4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms