Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF439Q8NDP4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 AC233702.3-201ENST00000578656 1387 ntBASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 MYCLP1-201ENST00000372451 1075 ntBASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 KRT18P35-201ENST00000510488 1269 ntBASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 AC009533.2-201ENST00000543664 586 ntBASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 AC109462.3-201ENST00000573934 613 ntBASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF439Q8NDP4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 AL049757.1-201ENST00000616842 1596 ntBASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 AC103564.2-201ENST00000432853 1299 ntBASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 IGHV3-52-201ENST00000519770 353 ntBASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 AP002414.4-201ENST00000589764 1148 ntBASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF439Q8NDP4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms